C
Coder.com•3y ago
Atif

can not activate conda enviornment in `startup_script`

atif@aihwkit:~$ cat build.log 

CommandNotFoundError: Your shell has not been properly configured to use 'conda activate'.
To initialize your shell, run

    $ conda init <SHELL_NAME>

Currently supported shells are:
  - bash
  - fish
  - tcsh
  - xonsh
  - zsh
  - powershell

See 'conda init --help' for more information and options.

IMPORTANT: You may need to close and restart your shell after running 'conda init'.


atif@aihwkit:~$ conda activate DL
(DL) atif@aihwkit:~$ 
atif@aihwkit:~$ cat build.log 

CommandNotFoundError: Your shell has not been properly configured to use 'conda activate'.
To initialize your shell, run

    $ conda init <SHELL_NAME>

Currently supported shells are:
  - bash
  - fish
  - tcsh
  - xonsh
  - zsh
  - powershell

See 'conda init --help' for more information and options.

IMPORTANT: You may need to close and restart your shell after running 'conda init'.


atif@aihwkit:~$ conda activate DL
(DL) atif@aihwkit:~$
9 Replies
Atif
AtifOP•3y ago
conda activate works when i login through the web terminal so it ensures that shell has been configured to run conda activate command But this does not work in the template startup_script fixed it by specifying full path of jupyter /home/${data.coder_workspace.me.owner}/miniconda/envs/DL/bin/jupyter notebook --no-browser --NotebookApp.token='' --ip='*' --NotebookApp.base_url=/@${data.coder_workspace.me.owner}/${lower(data.coder_workspace.me.name)}/apps/jupyter-notebook/ 2>&1 | tee -a ~/build.log &
Phorcys
Phorcys•3y ago
? oh i see you fixed it already good, because I had no clue of what to do
Atif
AtifOP•3y ago
but I am wondering why the startup_script could not initialize the conda env
Phorcys
Phorcys•3y ago
well, did you try doing conda init bash ? in your startup_script 
conda init bash
source ~/.bashrc
jupyter [...]
conda init bash
source ~/.bashrc
jupyter [...]
Atif
AtifOP•3y ago
I am doing it while building my image and it adds to .bashrc
Phorcys
Phorcys•3y ago
oh well then this should work
Atif
AtifOP•3y ago
also after we run conda init bash we can not activate in the same shell we need to open a new shell or source .bashrc that could work but for now I am using the full path of jupyter and it is working.
Phorcys
Phorcys•3y ago
alright mark as resolved if it's good for you
Atif
AtifOP•3y ago
ok

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